Multiple sequence alignments and phylogenetic trees for plant families

The number of species represented in each alignment is indicated. Click on the number to visualize the alignment and phylogenetic tree.

The table describes the number of sequences for each region-family:
- The alignment and neighbor joining phylogenetic tree of each region-family were calculated in GENEIOUS.
- The trees were generated using Tamura-Nei model. Both phylogenetic trees and alignments can be refined in WASABI with PAGAN and PRANK.

Family	atpF-atpH	psbA-trnH	trnL CD	trnL GH	rbcL	matK	ITS	Number of Regions
Amaryllidaceae Wikipedia ToL Taxonomy			18	440	19	150	920	5
Annonaceae Wikipedia ToL Taxonomy		129	87	670	289	23		5
Apocynaceae Wikipedia ToL Taxonomy		58	22	810		76		4
Araceae Wikipedia ToL Taxonomy	34		63	434	27	287		5
Asteraceae Wikipedia ToL Taxonomy	62	275	283	1955	126	603	1155	7
Boraginaceae Wikipedia ToL Taxonomy		102	27	405		24		4
Brassicaceae Wikipedia ToL Taxonomy	14	16	176	1236		98	58	6
Burseraceae Wikipedia ToL Taxonomy		62	20	69				3
Cactaceae Wikipedia ToL Taxonomy		15	84	449		278		4
Caryophyllaceae Wikipedia ToL Taxonomy			28	189		96		3
Cephalotaxaceae Wikipedia ToL Taxonomy			13	13				2
Cyatheaceae Wikipedia ToL Taxonomy			11		56			2
Ericaceae Wikipedia ToL Taxonomy			10	344	27	192	93	5
Eriocaulaceae Wikipedia ToL Taxonomy			33					1
Euphorbiaceae Wikipedia ToL Taxonomy			39	796	12	179		4
Fabaceae Wikipedia ToL Taxonomy		358	232	2599		1476	49	5
Gesneriaceae Wikipedia ToL Taxonomy		213	21	556		135		4
Gnetaceae Wikipedia ToL Taxonomy			13			12		2
Goodeniaceae Wikipedia ToL Taxonomy			13	164				2
Iridaceae Wikipedia ToL Taxonomy	22	61	15	518		210	350	6
Juncaceae Wikipedia ToL Taxonomy			48	90				2
Lamiaceae Wikipedia ToL Taxonomy		84	22	707		178	20	5
Liliaceae Wikipedia ToL Taxonomy	37		15	160		129	416	5
Magnoliaceae Wikipedia ToL Taxonomy		23	10	48		73		4
Malvaceae Wikipedia ToL Taxonomy			24	214		142	665	4
Melanthiaceae Wikipedia ToL Taxonomy	19		19	83		75		4
Oleaceae Wikipedia ToL Taxonomy		11	13	135	21	16		5
Orchidaceae Wikipedia ToL Taxonomy	21	68	40	1538	16	1038	51	7
Orobanchaceae Wikipedia ToL Taxonomy		24	57	320	12	102	10	6
Pinaceae Wikipedia ToL Taxonomy	58	50	55		23	123		5
Poaceae Wikipedia ToL Taxonomy	181	425	397	2078	107	476	830	7
Polygonaceae Wikipedia ToL Taxonomy		49	12	215	19	58	39	6
Rosaceae Wikipedia ToL Taxonomy	22	228	21	766		273	581	6
Rubiaceae Wikipedia ToL Taxonomy	11	115	335	1427		42	49	6
Rutaceae Wikipedia ToL Taxonomy			17	186		152		3
Salicaceae Wikipedia ToL Taxonomy	11	11	17	124			176	5
Saxifragaceae Wikipedia ToL Taxonomy		20	12	105		20		4
Scrophulariaceae Wikipedia ToL Taxonomy			49	198		10		3
Solanaceae Wikipedia ToL Taxonomy		160	26	721		100		4
Stilbaceae Wikipedia ToL Taxonomy			13	15				2
Taxaceae Wikipedia ToL Taxonomy			24	12	42	27		4
Theaceae Wikipedia ToL Taxonomy			19	82		30	98	4
Verbenaceae Wikipedia ToL Taxonomy			38	161				2
Vitaceae Wikipedia ToL Taxonomy		115	36	300				3